Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.6□□□□□ -0.23
EFNA3P52797 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.6□□□□□ -0.23
EFNA3P52797 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.6□□□□□ -0.23
EFNA3P52797 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.6□□□□□ -0.23
EFNA3P52797 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 SORD2P-201ENST00000558556 1069 ntBASIC13.6□□□□□ -0.23
EFNA3P52797 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.6□□□□□ -0.23
EFNA3P52797 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.6□□□□□ -0.23
EFNA3P52797 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
EFNA3P52797 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.6□□□□□ -0.23
EFNA3P52797 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 AC067750.1-201ENST00000608826 6545 ntBASIC13.59□□□□□ -0.23
EFNA3P52797 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 AL662890.1-201ENST00000396818 632 ntBASIC13.59□□□□□ -0.23
EFNA3P52797 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.59□□□□□ -0.23
EFNA3P52797 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.59□□□□□ -0.23
EFNA3P52797 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.59□□□□□ -0.23
EFNA3P52797 AC116345.2-201ENST00000512837 523 ntBASIC13.59□□□□□ -0.23
EFNA3P52797 RNA5SP423-201ENST00000517127 109 ntBASIC13.59□□□□□ -0.23
EFNA3P52797 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 AL161670.2-201ENST00000557650 1227 ntBASIC13.59□□□□□ -0.23
EFNA3P52797 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.59□□□□□ -0.23
EFNA3P52797 FGFR3P5-201ENST00000564496 886 ntBASIC13.59□□□□□ -0.23
EFNA3P52797 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.59□□□□□ -0.23
EFNA3P52797 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 AL133499.1-201ENST00000596207 608 ntBASIC13.59□□□□□ -0.23
EFNA3P52797 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 AC012617.1-204ENST00000586340 2305 ntBASIC13.59□□□□□ -0.23
EFNA3P52797 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
EFNA3P52797 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
EFNA3P52797 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNA3P52797 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
EFNA3P52797 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
EFNA3P52797 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
EFNA3P52797 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.58□□□□□ -0.23
EFNA3P52797 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.58□□□□□ -0.23
EFNA3P52797 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
EFNA3P52797 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.58□□□□□ -0.23
EFNA3P52797 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
EFNA3P52797 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
EFNA3P52797 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNA3P52797 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNA3P52797 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.58□□□□□ -0.24
EFNA3P52797 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 AL008707.1-201ENST00000422498 534 ntBASIC13.58□□□□□ -0.24
EFNA3P52797 TPT1P11-201ENST00000458482 498 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms