Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TM4SF1P30408 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.65■□□□□ 0.42
TM4SF1P30408 AC023141.7-201ENST00000430646 407 ntBASIC17.65■□□□□ 0.42
TM4SF1P30408 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.65■□□□□ 0.42
TM4SF1P30408 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.65■□□□□ 0.42
TM4SF1P30408 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.65■□□□□ 0.42
TM4SF1P30408 AC092612.1-201ENST00000514501 998 ntBASIC17.65■□□□□ 0.42
TM4SF1P30408 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 BAK1P2-201ENST00000532665 631 ntBASIC17.65■□□□□ 0.42
TM4SF1P30408 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.65■□□□□ 0.42
TM4SF1P30408 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.65■□□□□ 0.42
TM4SF1P30408 AC132825.4-202ENST00000578792 434 ntBASIC17.65■□□□□ 0.42
TM4SF1P30408 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.65■□□□□ 0.42
TM4SF1P30408 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.65■□□□□ 0.42
TM4SF1P30408 AC126755.5-201ENST00000622756 267 ntBASIC17.65■□□□□ 0.42
TM4SF1P30408 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.65■□□□□ 0.42
TM4SF1P30408 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.65■□□□□ 0.42
TM4SF1P30408 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.65■□□□□ 0.42
TM4SF1P30408 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TM4SF1P30408 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.65■□□□□ 0.42
TM4SF1P30408 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TM4SF1P30408 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF1P30408 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
TM4SF1P30408 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TM4SF1P30408 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.64■□□□□ 0.42
TM4SF1P30408 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TM4SF1P30408 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TM4SF1P30408 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
TM4SF1P30408 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF1P30408 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
TM4SF1P30408 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF1P30408 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 NHP2P1-201ENST00000335274 462 ntBASIC17.64■□□□□ 0.41
TM4SF1P30408 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 AC022080.1-201ENST00000366255 781 ntBASIC17.64■□□□□ 0.41
TM4SF1P30408 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF1P30408 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.64■□□□□ 0.41
TM4SF1P30408 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF1P30408 AC092896.1-201ENST00000465850 380 ntBASIC17.64■□□□□ 0.41
TM4SF1P30408 RPS18P9-201ENST00000482817 460 ntBASIC17.64■□□□□ 0.41
TM4SF1P30408 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.64■□□□□ 0.41
TM4SF1P30408 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
TM4SF1P30408 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF1P30408 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF1P30408 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.64■□□□□ 0.41
TM4SF1P30408 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF1P30408 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF1P30408 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF1P30408 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF1P30408 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF1P30408 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TM4SF1P30408 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TM4SF1P30408 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF1P30408 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TM4SF1P30408 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
TM4SF1P30408 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
TM4SF1P30408 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.63■□□□□ 0.41
TM4SF1P30408 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.63■□□□□ 0.41
TM4SF1P30408 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.63■□□□□ 0.41
TM4SF1P30408 NRADDP-201ENST00000437305 691 ntBASIC17.63■□□□□ 0.41
TM4SF1P30408 AC025594.1-201ENST00000469533 543 ntBASIC17.63■□□□□ 0.41
TM4SF1P30408 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.63■□□□□ 0.41
TM4SF1P30408 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TM4SF1P30408 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.63■□□□□ 0.41
TM4SF1P30408 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC17.63■□□□□ 0.41
TM4SF1P30408 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.63■□□□□ 0.41
TM4SF1P30408 URAHP-205ENST00000610227 398 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms