Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCNAP12004 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCNAP12004 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PCNAP12004 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PCNAP12004 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PCNAP12004 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.27□□□□□ -0.12
PCNAP12004 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.27□□□□□ -0.12
PCNAP12004 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PCNAP12004 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PCNAP12004 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 CICP20-201ENST00000443330 2801 ntBASIC14.27□□□□□ -0.12
PCNAP12004 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.27□□□□□ -0.12
PCNAP12004 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCNAP12004 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.27□□□□□ -0.13
PCNAP12004 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.27□□□□□ -0.13
PCNAP12004 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.27□□□□□ -0.13
PCNAP12004 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.27□□□□□ -0.13
PCNAP12004 GCOM2-201ENST00000509133 1104 ntBASIC14.27□□□□□ -0.13
PCNAP12004 RNA5SP486-201ENST00000515961 83 ntBASIC14.27□□□□□ -0.13
PCNAP12004 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.27□□□□□ -0.13
PCNAP12004 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.27□□□□□ -0.13
PCNAP12004 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.27□□□□□ -0.13
PCNAP12004 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.27□□□□□ -0.13
PCNAP12004 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.27□□□□□ -0.13
PCNAP12004 OR10B1P-201ENST00000601666 907 ntBASIC14.27□□□□□ -0.13
PCNAP12004 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PCNAP12004 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.27□□□□□ -0.13
PCNAP12004 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.27□□□□□ -0.13
PCNAP12004 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.27□□□□□ -0.13
PCNAP12004 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 AL359881.3-201ENST00000602640 1721 ntBASIC14.27□□□□□ -0.13
PCNAP12004 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCNAP12004 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 AL354989.2-201ENST00000435838 1540 ntBASIC14.26□□□□□ -0.13
PCNAP12004 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PCNAP12004 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.26□□□□□ -0.13
PCNAP12004 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.26□□□□□ -0.13
PCNAP12004 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PCNAP12004 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
PCNAP12004 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PCNAP12004 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 AL035633.1-201ENST00000406139 838 ntBASIC14.26□□□□□ -0.13
PCNAP12004 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.26□□□□□ -0.13
PCNAP12004 NME2P1-201ENST00000426182 414 ntBASIC14.26□□□□□ -0.13
PCNAP12004 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.26□□□□□ -0.13
PCNAP12004 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 FAM8A4P-201ENST00000435433 1213 ntBASIC14.26□□□□□ -0.13
PCNAP12004 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.26□□□□□ -0.13
PCNAP12004 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.26□□□□□ -0.13
PCNAP12004 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.26□□□□□ -0.13
PCNAP12004 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.26□□□□□ -0.13
PCNAP12004 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.26□□□□□ -0.13
PCNAP12004 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.26□□□□□ -0.13
PCNAP12004 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.26□□□□□ -0.13
PCNAP12004 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.26□□□□□ -0.13
PCNAP12004 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.26□□□□□ -0.13
PCNAP12004 AC138951.2-201ENST00000623455 1161 ntBASIC14.26□□□□□ -0.13
PCNAP12004 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.26□□□□□ -0.13
PCNAP12004 AC105233.6-201ENST00000642093 218 ntBASIC14.26□□□□□ -0.13
PCNAP12004 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PCNAP12004 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.26□□□□□ -0.13
PCNAP12004 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.26□□□□□ -0.13
PCNAP12004 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.26□□□□□ -0.13
PCNAP12004 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 CICP8-201ENST00000455800 2813 ntBASIC14.26□□□□□ -0.13
PCNAP12004 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCNAP12004 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCNAP12004 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms