Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.67□□□□□ -0.22
TRIM3O75382 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRIM3O75382 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.67□□□□□ -0.22
TRIM3O75382 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
TRIM3O75382 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.67□□□□□ -0.22
TRIM3O75382 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRIM3O75382 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRIM3O75382 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.67□□□□□ -0.22
TRIM3O75382 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.67□□□□□ -0.22
TRIM3O75382 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.67□□□□□ -0.22
TRIM3O75382 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.67□□□□□ -0.22
TRIM3O75382 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.67□□□□□ -0.22
TRIM3O75382 PPY2P-201ENST00000582808 702 ntBASIC13.67□□□□□ -0.22
TRIM3O75382 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.67□□□□□ -0.22
TRIM3O75382 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRIM3O75382 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.67□□□□□ -0.22
TRIM3O75382 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM3O75382 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.67□□□□□ -0.22
TRIM3O75382 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM3O75382 AC099521.3-201ENST00000624251 2938 ntBASIC13.67□□□□□ -0.22
TRIM3O75382 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRIM3O75382 AL138725.1-201ENST00000407347 1314 ntBASIC13.66□□□□□ -0.22
TRIM3O75382 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM3O75382 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRIM3O75382 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM3O75382 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 FAM86MP-201ENST00000340703 885 ntBASIC13.66□□□□□ -0.22
TRIM3O75382 RN7SKP230-201ENST00000365642 335 ntBASIC13.66□□□□□ -0.22
TRIM3O75382 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 BRWD1P1-201ENST00000401091 371 ntBASIC13.66□□□□□ -0.22
TRIM3O75382 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 AL136309.1-201ENST00000403917 691 ntBASIC13.66□□□□□ -0.22
TRIM3O75382 AC004945.1-201ENST00000416738 983 ntBASIC13.66□□□□□ -0.22
TRIM3O75382 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM3O75382 GOLGA2P4-201ENST00000441462 777 ntBASIC13.66□□□□□ -0.22
TRIM3O75382 Z93015.1-201ENST00000451718 390 ntBASIC13.66□□□□□ -0.22
TRIM3O75382 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM3O75382 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM3O75382 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM3O75382 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM3O75382 PEG13-201ENST00000631594 5667 ntBASIC13.66□□□□□ -0.22
TRIM3O75382 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM3O75382 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms