Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 KRT8P24-201ENST00000560290 1559 ntBASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 KRT8P28-201ENST00000433288 1390 ntBASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AC092933.1-201ENST00000393644 945 ntBASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AC004945.1-201ENST00000416738 983 ntBASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 FAM8A4P-201ENST00000435433 1213 ntBASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AL035414.1-201ENST00000451327 857 ntBASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 USP32P1-208ENST00000506594 1164 ntBASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 MIR4525-201ENST00000580000 75 ntBASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AL606495.2-201ENST00000605867 535 ntBASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 AC002472.3-201ENST00000640124 621 ntBASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.82□□□□□ -0.2
NEUROD4Q9HD90 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AL354989.2-201ENST00000435838 1540 ntBASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms