Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 RN7SKP230-201ENST00000365642 335 ntBASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 AL139400.1-201ENST00000366220 510 ntBASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 USP17L6P-201ENST00000382470 1197 ntBASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 ZNF890P-202ENST00000530367 1156 ntBASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 AL662799.1-202ENST00000614205 422 ntBASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CKAP2Q8WWK9 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 AC131212.3-201ENST00000624087 4219 ntBASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 ABCD1P2-201ENST00000429313 1601 ntBASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 GIMAP3P-201ENST00000495150 836 ntBASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 AL512356.2-201ENST00000546955 174 ntBASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 AL049840.4-201ENST00000602422 811 ntBASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 AC010970.1-201ENST00000445125 1848 ntBASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 MEX3B-202ENST00000558133 4333 ntBASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKAP2Q8WWK9 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms