Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 AC006001.1-201ENST00000325130 474 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 AC026954.1-201ENST00000429771 1293 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 AC100850.1-201ENST00000506768 649 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 CHMP4BP1-201ENST00000556017 588 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 ECM1P1-201ENST00000604092 1279 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 SALL4P5-201ENST00000419001 1760 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 AC009486.1-201ENST00000569860 813 ntBASIC12.97□□□□□ -0.33
RTTNQ86VV8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 AC007969.1-201ENST00000433675 447 ntBASIC12.97□□□□□ -0.33
RTTNQ86VV8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 MIR4783-201ENST00000580343 82 ntBASIC12.97□□□□□ -0.33
RTTNQ86VV8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 AL008638.5-201ENST00000623814 1298 ntBASIC12.97□□□□□ -0.33
RTTNQ86VV8 AC006453.4-201ENST00000636949 1252 ntBASIC12.97□□□□□ -0.33
RTTNQ86VV8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTTNQ86VV8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
RTTNQ86VV8 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTTNQ86VV8 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTTNQ86VV8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.96□□□□□ -0.33
RTTNQ86VV8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTTNQ86VV8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.96□□□□□ -0.33
RTTNQ86VV8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTTNQ86VV8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTTNQ86VV8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTTNQ86VV8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms