Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC20.26■□□□□ 0.83
SPHKAPQ2M3C7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPHKAPQ2M3C7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPHKAPQ2M3C7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 GULOP-201ENST00000454030 748 ntBASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 AC126755.5-201ENST00000622756 267 ntBASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 BX640514.1-201ENST00000583223 1918 ntBASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHKAPQ2M3C7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 RHOC-205ENST00000369636 786 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 RBM4-207ENST00000506523 654 ntTSL 3 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 FAM86B3P-203ENST00000523992 854 ntBASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 AL160191.2-201ENST00000603975 601 ntBASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 GARS-210ENST00000627489 324 ntTSL 4 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 AC140479.7-201ENST00000636301 2332 ntBASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 AC148477.9-201ENST00000623974 539 ntBASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 AP000769.1-203ENST00000637245 208 ntBASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPHKAPQ2M3C7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 RCC2P1-201ENST00000452257 1476 ntBASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 FKBP4P8-201ENST00000610931 1369 ntBASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 DKKL1P1-201ENST00000400550 698 ntBASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 FAM21EP-201ENST00000417804 985 ntBASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 MT3-202ENST00000561640 514 ntTSL 3 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 ABHD17AP9-201ENST00000561925 548 ntBASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.23■□□□□ 0.83
SPHKAPQ2M3C7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPHKAPQ2M3C7 GOLGA8VP-201ENST00000559009 1798 ntBASIC20.22■□□□□ 0.83
SPHKAPQ2M3C7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPHKAPQ2M3C7 RNA5SP491-201ENST00000362936 118 ntBASIC20.22■□□□□ 0.83
SPHKAPQ2M3C7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC20.22■□□□□ 0.83
SPHKAPQ2M3C7 AL929302.1-201ENST00000426556 871 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms