Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 OR8S1-201ENST00000310194 1080 ntBASIC13.79□□□□□ -0.2
RPS3AP61247 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 AC005229.1-201ENST00000392885 409 ntBASIC13.79□□□□□ -0.2
RPS3AP61247 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 AC114812.1-204ENST00000449669 728 ntBASIC13.79□□□□□ -0.2
RPS3AP61247 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 AC022137.2-201ENST00000503482 481 ntBASIC13.79□□□□□ -0.2
RPS3AP61247 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.79□□□□□ -0.2
RPS3AP61247 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 AC015802.1-201ENST00000588104 1449 ntBASIC13.79□□□□□ -0.2
RPS3AP61247 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RPS3AP61247 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.78□□□□□ -0.2
RPS3AP61247 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.78□□□□□ -0.2
RPS3AP61247 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RPS3AP61247 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 AP001972.5-201ENST00000624624 2338 ntBASIC13.78□□□□□ -0.2
RPS3AP61247 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RPS3AP61247 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.78□□□□□ -0.2
RPS3AP61247 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 TMEM14DP-201ENST00000422205 345 ntBASIC13.78□□□□□ -0.2
RPS3AP61247 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.78□□□□□ -0.2
RPS3AP61247 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.78□□□□□ -0.2
RPS3AP61247 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RPS3AP61247 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 AC018665.1-201ENST00000622927 1362 ntBASIC13.78□□□□□ -0.2
RPS3AP61247 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RPS3AP61247 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RPS3AP61247 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RPS3AP61247 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RPS3AP61247 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPS3AP61247 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms