Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SLC6A12P48065 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SLC6A12P48065 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 AC023794.5-201ENST00000564380 2157 ntBASIC14□□□□□ -0.17
SLC6A12P48065 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 MBLAC2-202ENST00000514906 1936 ntBASIC14□□□□□ -0.17
SLC6A12P48065 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14□□□□□ -0.17
SLC6A12P48065 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14□□□□□ -0.17
SLC6A12P48065 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 KRT18P36-201ENST00000411618 1276 ntBASIC14□□□□□ -0.17
SLC6A12P48065 AC244107.1-201ENST00000442033 332 ntBASIC14□□□□□ -0.17
SLC6A12P48065 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14□□□□□ -0.17
SLC6A12P48065 FAM86HP-204ENST00000513466 959 ntBASIC14□□□□□ -0.17
SLC6A12P48065 AC022217.1-201ENST00000521069 738 ntBASIC14□□□□□ -0.17
SLC6A12P48065 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 AGER-214ENST00000538695 487 ntTSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
SLC6A12P48065 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14□□□□□ -0.17
SLC6A12P48065 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SLC6A12P48065 AC005324.6-201ENST00000587972 613 ntBASIC14□□□□□ -0.17
SLC6A12P48065 AP000346.4-201ENST00000614827 381 ntBASIC14□□□□□ -0.17
SLC6A12P48065 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14□□□□□ -0.17
SLC6A12P48065 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14□□□□□ -0.17
SLC6A12P48065 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLC6A12P48065 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SLC6A12P48065 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SLC6A12P48065 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 AC010327.5-201ENST00000586923 3061 ntBASIC13.99□□□□□ -0.17
SLC6A12P48065 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SLC6A12P48065 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 MIR663B-201ENST00000408361 115 ntBASIC13.99□□□□□ -0.17
SLC6A12P48065 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC6A12P48065 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 TUBB8P8-201ENST00000458717 1058 ntBASIC13.99□□□□□ -0.17
SLC6A12P48065 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC6A12P48065 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC6A12P48065 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC6A12P48065 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC6A12P48065 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC6A12P48065 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC6A12P48065 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC6A12P48065 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC6A12P48065 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SLC6A12P48065 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SLC6A12P48065 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC6A12P48065 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC6A12P48065 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC6A12P48065 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms