Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA10P31260 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA10P31260 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA10P31260 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA10P31260 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA10P31260 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA10P31260 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA10P31260 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXA10P31260 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.39■□□□□ 0.37
HOXA10P31260 RN7SL128P-201ENST00000467883 305 ntBASIC17.39■□□□□ 0.37
HOXA10P31260 AC022447.6-201ENST00000515522 438 ntBASIC17.39■□□□□ 0.37
HOXA10P31260 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA10P31260 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXA10P31260 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA10P31260 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXA10P31260 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA10P31260 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HOXA10P31260 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HOXA10P31260 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HOXA10P31260 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA10P31260 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HOXA10P31260 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA10P31260 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA10P31260 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA10P31260 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA10P31260 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA10P31260 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HOXA10P31260 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA10P31260 AC004554.1-201ENST00000422830 1468 ntBASIC17.38■□□□□ 0.37
HOXA10P31260 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA10P31260 AC023157.3-201ENST00000619086 2088 ntBASIC17.38■□□□□ 0.37
HOXA10P31260 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA10P31260 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA10P31260 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA10P31260 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HOXA10P31260 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA10P31260 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA10P31260 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA10P31260 PTGER4P2-201ENST00000328411 252 ntBASIC17.38■□□□□ 0.37
HOXA10P31260 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA10P31260 PTGER4P3-201ENST00000458150 252 ntBASIC17.38■□□□□ 0.37
HOXA10P31260 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA10P31260 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXA10P31260 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXA10P31260 AC005777.1-201ENST00000588332 187 ntBASIC17.38■□□□□ 0.37
HOXA10P31260 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXA10P31260 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA10P31260 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA10P31260 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA10P31260 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA10P31260 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HOXA10P31260 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HOXA10P31260 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA10P31260 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA10P31260 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
HOXA10P31260 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HOXA10P31260 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
HOXA10P31260 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
HOXA10P31260 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.37■□□□□ 0.37
HOXA10P31260 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HOXA10P31260 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.37■□□□□ 0.37
HOXA10P31260 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 AC087203.1-201ENST00000532111 1181 ntBASIC17.37■□□□□ 0.37
HOXA10P31260 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXA10P31260 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.37■□□□□ 0.37
HOXA10P31260 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.37■□□□□ 0.37
HOXA10P31260 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXA10P31260 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXA10P31260 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HOXA10P31260 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HOXA10P31260 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HOXA10P31260 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HOXA10P31260 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA10P31260 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HOXA10P31260 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms