Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.58□□□□□ -0.55
IFNA1P01562 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
IFNA1P01562 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.58□□□□□ -0.56
IFNA1P01562 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 AKR1C7P-201ENST00000305623 895 ntBASIC11.58□□□□□ -0.56
IFNA1P01562 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
IFNA1P01562 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.58□□□□□ -0.56
IFNA1P01562 AL353705.2-201ENST00000428243 662 ntBASIC11.58□□□□□ -0.56
IFNA1P01562 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.58□□□□□ -0.56
IFNA1P01562 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.58□□□□□ -0.56
IFNA1P01562 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.58□□□□□ -0.56
IFNA1P01562 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.58□□□□□ -0.56
IFNA1P01562 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
IFNA1P01562 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.58□□□□□ -0.56
IFNA1P01562 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.58□□□□□ -0.56
IFNA1P01562 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.58□□□□□ -0.56
IFNA1P01562 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 AC107375.1-201ENST00000564464 2231 ntBASIC11.58□□□□□ -0.56
IFNA1P01562 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
IFNA1P01562 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.57□□□□□ -0.56
IFNA1P01562 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.57□□□□□ -0.56
IFNA1P01562 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.57□□□□□ -0.56
IFNA1P01562 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
IFNA1P01562 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.57□□□□□ -0.56
IFNA1P01562 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.57□□□□□ -0.56
IFNA1P01562 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.57□□□□□ -0.56
IFNA1P01562 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
IFNA1P01562 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 AF186996.4-201ENST00000467186 377 ntBASIC11.57□□□□□ -0.56
IFNA1P01562 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.57□□□□□ -0.56
IFNA1P01562 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.57□□□□□ -0.56
IFNA1P01562 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.57□□□□□ -0.56
IFNA1P01562 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.57□□□□□ -0.56
IFNA1P01562 AL135744.1-201ENST00000565098 629 ntBASIC11.57□□□□□ -0.56
IFNA1P01562 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
IFNA1P01562 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.57□□□□□ -0.56
IFNA1P01562 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
IFNA1P01562 AC093458.2-201ENST00000623150 629 ntBASIC11.57□□□□□ -0.56
IFNA1P01562 AC004877.2-201ENST00000623941 599 ntBASIC11.57□□□□□ -0.56
IFNA1P01562 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.57□□□□□ -0.56
IFNA1P01562 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
IFNA1P01562 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC11.57□□□□□ -0.56
IFNA1P01562 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.57□□□□□ -0.56
IFNA1P01562 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
IFNA1P01562 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
IFNA1P01562 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms