Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 CLUHP6-201ENST00000580789 941 ntBASIC13.41□□□□□ -0.26
CENPBD1B2RD01 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.41□□□□□ -0.26
CENPBD1B2RD01 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.41□□□□□ -0.26
CENPBD1B2RD01 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPBD1B2RD01 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 KRT8P35-201ENST00000483942 1338 ntBASIC13.4□□□□□ -0.26
CENPBD1B2RD01 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 ACTG1P3-201ENST00000431775 1114 ntBASIC13.4□□□□□ -0.26
CENPBD1B2RD01 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPBD1B2RD01 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
CENPBD1B2RD01 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.4□□□□□ -0.27
CENPBD1B2RD01 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CENPBD1B2RD01 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CENPBD1B2RD01 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
CENPBD1B2RD01 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 AC023090.2-201ENST00000625182 2110 ntBASIC13.39□□□□□ -0.27
CENPBD1B2RD01 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
CENPBD1B2RD01 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms