Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CBX8Q9HC52 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 ACTBP8-201ENST00000403258 1108 ntBASIC16.31■□□□□ 0.2
CBX8Q9HC52 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 BX088702.1-201ENST00000610784 235 ntBASIC16.31■□□□□ 0.2
CBX8Q9HC52 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 PCDHB18P-202ENST00000526308 3197 ntBASIC16.31■□□□□ 0.2
CBX8Q9HC52 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
CBX8Q9HC52 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX8Q9HC52 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 MIR943-201ENST00000401286 94 ntBASIC16.3■□□□□ 0.2
CBX8Q9HC52 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 DOC2GP-202ENST00000514950 1163 ntBASIC16.3■□□□□ 0.2
CBX8Q9HC52 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.3■□□□□ 0.2
CBX8Q9HC52 AC022144.1-201ENST00000602255 1580 ntBASIC16.3■□□□□ 0.2
CBX8Q9HC52 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CBX8Q9HC52 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 CLUHP2-201ENST00000426660 1303 ntBASIC16.29■□□□□ 0.2
CBX8Q9HC52 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms