Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PACS2Q86VP3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
PACS2Q86VP3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PACS2Q86VP3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PACS2Q86VP3 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PACS2Q86VP3 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.86□□□□□ -0.03
PACS2Q86VP3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 AC011498.7-201ENST00000624986 2027 ntBASIC14.85□□□□□ -0.03
PACS2Q86VP3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 MIR770-201ENST00000390219 98 ntBASIC14.85□□□□□ -0.03
PACS2Q86VP3 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.85□□□□□ -0.03
PACS2Q86VP3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 DUX4L27-201ENST00000554796 1261 ntBASIC14.85□□□□□ -0.03
PACS2Q86VP3 RPAP2P1-201ENST00000603626 1168 ntBASIC14.85□□□□□ -0.03
PACS2Q86VP3 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 PCDHB19P-202ENST00000625133 2914 ntBASIC14.85□□□□□ -0.03
PACS2Q86VP3 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 LINC00638-201ENST00000555578 2518 ntBASIC14.85□□□□□ -0.03
PACS2Q86VP3 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PACS2Q86VP3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PACS2Q86VP3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 AC112176.1-201ENST00000565428 3024 ntBASIC14.84□□□□□ -0.03
PACS2Q86VP3 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 AC061975.2-201ENST00000581722 295 ntBASIC14.84□□□□□ -0.03
PACS2Q86VP3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.84□□□□□ -0.03
PACS2Q86VP3 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PACS2Q86VP3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms