Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.89□□□□□ -0.19
SKP1P63208 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SKP1P63208 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
SKP1P63208 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SKP1P63208 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.89□□□□□ -0.19
SKP1P63208 AC244394.1-201ENST00000435000 1665 ntBASIC13.89□□□□□ -0.19
SKP1P63208 CICP24-201ENST00000605464 2705 ntBASIC13.89□□□□□ -0.19
SKP1P63208 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
SKP1P63208 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SKP1P63208 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SKP1P63208 MIR1908-201ENST00000410394 80 ntBASIC13.89□□□□□ -0.19
SKP1P63208 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.89□□□□□ -0.19
SKP1P63208 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.89□□□□□ -0.19
SKP1P63208 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.89□□□□□ -0.19
SKP1P63208 AL157407.1-201ENST00000435784 904 ntBASIC13.89□□□□□ -0.19
SKP1P63208 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.89□□□□□ -0.19
SKP1P63208 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.89□□□□□ -0.19
SKP1P63208 AC126915.1-201ENST00000522847 1038 ntBASIC13.89□□□□□ -0.19
SKP1P63208 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
SKP1P63208 AL008638.5-201ENST00000623814 1298 ntBASIC13.89□□□□□ -0.19
SKP1P63208 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SKP1P63208 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SKP1P63208 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
SKP1P63208 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SKP1P63208 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SKP1P63208 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SKP1P63208 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.89□□□□□ -0.19
SKP1P63208 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.89□□□□□ -0.19
SKP1P63208 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.89□□□□□ -0.19
SKP1P63208 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SKP1P63208 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SKP1P63208 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SKP1P63208 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
SKP1P63208 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SKP1P63208 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SKP1P63208 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 AC232323.1-201ENST00000540724 2099 ntBASIC13.88□□□□□ -0.19
SKP1P63208 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.88□□□□□ -0.19
SKP1P63208 AC104306.2-201ENST00000451877 341 ntBASIC13.88□□□□□ -0.19
SKP1P63208 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SKP1P63208 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 AC005740.2-201ENST00000511085 419 ntBASIC13.88□□□□□ -0.19
SKP1P63208 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 AC005586.2-201ENST00000563946 837 ntBASIC13.88□□□□□ -0.19
SKP1P63208 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.88□□□□□ -0.19
SKP1P63208 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.88□□□□□ -0.19
SKP1P63208 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SKP1P63208 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.88□□□□□ -0.19
SKP1P63208 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SKP1P63208 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.88□□□□□ -0.19
SKP1P63208 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.88□□□□□ -0.19
SKP1P63208 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms