Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.6■□□□□ 0.57
COL5A2P05997 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.6■□□□□ 0.57
COL5A2P05997 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.6■□□□□ 0.57
COL5A2P05997 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.59■□□□□ 0.57
COL5A2P05997 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL5A2P05997 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
COL5A2P05997 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC18.59■□□□□ 0.57
COL5A2P05997 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL5A2P05997 GULOP-201ENST00000454030 748 ntBASIC18.59■□□□□ 0.57
COL5A2P05997 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.59■□□□□ 0.57
COL5A2P05997 MED11-202ENST00000573708 802 ntTSL 2 BASIC18.59■□□□□ 0.57
COL5A2P05997 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC18.59■□□□□ 0.57
COL5A2P05997 BX322534.1-201ENST00000635574 241 ntBASIC18.59■□□□□ 0.57
COL5A2P05997 AC215524.1-201ENST00000635696 241 ntBASIC18.59■□□□□ 0.57
COL5A2P05997 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC18.59■□□□□ 0.57
COL5A2P05997 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL5A2P05997 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.59■□□□□ 0.57
COL5A2P05997 AC006486.2-201ENST00000624246 2199 ntBASIC18.59■□□□□ 0.57
COL5A2P05997 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.59■□□□□ 0.57
COL5A2P05997 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL5A2P05997 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL5A2P05997 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
COL5A2P05997 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
COL5A2P05997 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL5A2P05997 RHOC-205ENST00000369636 786 ntTSL 2 BASIC18.58■□□□□ 0.57
COL5A2P05997 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
COL5A2P05997 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC18.58■□□□□ 0.57
COL5A2P05997 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
COL5A2P05997 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC18.58■□□□□ 0.57
COL5A2P05997 AC103563.1-201ENST00000429316 123 ntBASIC18.58■□□□□ 0.57
COL5A2P05997 AC092810.2-201ENST00000431570 362 ntBASIC18.58■□□□□ 0.57
COL5A2P05997 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC18.58■□□□□ 0.57
COL5A2P05997 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL5A2P05997 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.58■□□□□ 0.57
COL5A2P05997 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC18.58■□□□□ 0.57
COL5A2P05997 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC18.58■□□□□ 0.57
COL5A2P05997 MIR4254-201ENST00000581063 76 ntBASIC18.58■□□□□ 0.57
COL5A2P05997 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC18.58■□□□□ 0.57
COL5A2P05997 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC18.58■□□□□ 0.57
COL5A2P05997 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.58■□□□□ 0.57
COL5A2P05997 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.58■□□□□ 0.57
COL5A2P05997 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL5A2P05997 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
COL5A2P05997 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL5A2P05997 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL5A2P05997 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
COL5A2P05997 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.58■□□□□ 0.57
COL5A2P05997 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL5A2P05997 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
COL5A2P05997 AC020931.1-201ENST00000589622 1346 ntBASIC18.58■□□□□ 0.57
COL5A2P05997 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL5A2P05997 SALL4P6-201ENST00000429385 1691 ntBASIC18.58■□□□□ 0.57
COL5A2P05997 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL5A2P05997 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC18.58■□□□□ 0.57
COL5A2P05997 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.58■□□□□ 0.56
COL5A2P05997 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL5A2P05997 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL5A2P05997 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL5A2P05997 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC18.58■□□□□ 0.56
COL5A2P05997 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL5A2P05997 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.58■□□□□ 0.56
COL5A2P05997 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL5A2P05997 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL5A2P05997 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC18.58■□□□□ 0.56
COL5A2P05997 HNRNPA3P6-201ENST00000472163 1006 ntBASIC18.58■□□□□ 0.56
COL5A2P05997 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC18.58■□□□□ 0.56
COL5A2P05997 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.58■□□□□ 0.56
COL5A2P05997 BMF-206ENST00000558774 671 ntTSL 3 BASIC18.58■□□□□ 0.56
COL5A2P05997 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC18.58■□□□□ 0.56
COL5A2P05997 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL5A2P05997 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL5A2P05997 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.58■□□□□ 0.56
COL5A2P05997 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL5A2P05997 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.57■□□□□ 0.56
COL5A2P05997 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COL5A2P05997 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A2P05997 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms