Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HMGN1P05114 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.3□□□□□ -0.28
HMGN1P05114 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HMGN1P05114 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HMGN1P05114 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HMGN1P05114 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
HMGN1P05114 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HMGN1P05114 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.29□□□□□ -0.28
HMGN1P05114 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.29□□□□□ -0.28
HMGN1P05114 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.29□□□□□ -0.28
HMGN1P05114 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.29□□□□□ -0.28
HMGN1P05114 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.29□□□□□ -0.28
HMGN1P05114 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.29□□□□□ -0.28
HMGN1P05114 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 AC055876.2-201ENST00000531834 546 ntBASIC13.29□□□□□ -0.28
HMGN1P05114 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.29□□□□□ -0.28
HMGN1P05114 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.29□□□□□ -0.28
HMGN1P05114 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 AP001002.3-201ENST00000623482 206 ntBASIC13.29□□□□□ -0.28
HMGN1P05114 AC008761.3-201ENST00000624803 892 ntBASIC13.29□□□□□ -0.28
HMGN1P05114 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HMGN1P05114 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 STRCP1-201ENST00000509801 5328 ntBASIC13.29□□□□□ -0.28
HMGN1P05114 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGN1P05114 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGN1P05114 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.28□□□□□ -0.28
HMGN1P05114 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
HMGN1P05114 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.28□□□□□ -0.28
HMGN1P05114 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.28□□□□□ -0.28
HMGN1P05114 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.28□□□□□ -0.28
HMGN1P05114 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.28□□□□□ -0.28
HMGN1P05114 ENPP7P5-201ENST00000541031 1031 ntBASIC13.28□□□□□ -0.28
HMGN1P05114 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.28□□□□□ -0.28
HMGN1P05114 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms