Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 KRT17P5-201ENST00000332088 839 ntBASIC15.89■□□□□ 0.13
VTNP04004 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.89■□□□□ 0.13
VTNP04004 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.89■□□□□ 0.13
VTNP04004 AP000356.3-201ENST00000382243 753 ntBASIC15.89■□□□□ 0.13
VTNP04004 MIR557-201ENST00000385239 98 ntBASIC15.89■□□□□ 0.13
VTNP04004 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 AL807761.2-201ENST00000422849 729 ntBASIC15.89■□□□□ 0.13
VTNP04004 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.89■□□□□ 0.13
VTNP04004 DUTP3-201ENST00000450025 415 ntBASIC15.89■□□□□ 0.13
VTNP04004 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.89■□□□□ 0.13
VTNP04004 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VTNP04004 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
VTNP04004 AC093752.3-201ENST00000567343 901 ntBASIC15.89■□□□□ 0.13
VTNP04004 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.89■□□□□ 0.13
VTNP04004 SIGLEC18P-201ENST00000602271 909 ntBASIC15.89■□□□□ 0.13
VTNP04004 AC007326.1-201ENST00000604539 458 ntBASIC15.89■□□□□ 0.13
VTNP04004 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.89■□□□□ 0.13
VTNP04004 AC090386.2-201ENST00000623010 1039 ntBASIC15.89■□□□□ 0.13
VTNP04004 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.89■□□□□ 0.13
VTNP04004 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.89■□□□□ 0.13
VTNP04004 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.89■□□□□ 0.13
VTNP04004 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.89■□□□□ 0.13
VTNP04004 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 AC023824.1-201ENST00000562945 2975 ntBASIC15.88■□□□□ 0.13
VTNP04004 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 KRT8P31-201ENST00000504812 1408 ntBASIC15.88■□□□□ 0.13
VTNP04004 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.88■□□□□ 0.13
VTNP04004 AL592076.1-201ENST00000424448 303 ntBASIC15.88■□□□□ 0.13
VTNP04004 AL161932.2-201ENST00000435436 679 ntBASIC15.88■□□□□ 0.13
VTNP04004 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.88■□□□□ 0.13
VTNP04004 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.88■□□□□ 0.13
VTNP04004 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.88■□□□□ 0.13
VTNP04004 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.88■□□□□ 0.13
VTNP04004 MIR4522-201ENST00000584932 87 ntBASIC15.88■□□□□ 0.13
VTNP04004 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 AC138894.2-201ENST00000602838 371 ntBASIC15.88■□□□□ 0.13
VTNP04004 U62317.3-201ENST00000608319 855 ntBASIC15.88■□□□□ 0.13
VTNP04004 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 LAP3P2-201ENST00000454686 1454 ntBASIC15.88■□□□□ 0.13
VTNP04004 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
VTNP04004 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.88■□□□□ 0.13
VTNP04004 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.88■□□□□ 0.13
VTNP04004 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VTNP04004 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.87■□□□□ 0.13
VTNP04004 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.87■□□□□ 0.13
VTNP04004 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VTNP04004 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VTNP04004 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.87■□□□□ 0.13
VTNP04004 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VTNP04004 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VTNP04004 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VTNP04004 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VTNP04004 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.87■□□□□ 0.13
VTNP04004 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VTNP04004 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VTNP04004 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VTNP04004 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
VTNP04004 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms