Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 LINC00552-201ENST00000625151 2579 ntBASIC16.33■□□□□ 0.2
COL20A1Q9P218 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 MIR645-201ENST00000385283 94 ntBASIC16.32■□□□□ 0.2
COL20A1Q9P218 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 AC073869.2-201ENST00000417338 1026 ntBASIC16.32■□□□□ 0.2
COL20A1Q9P218 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 AL592076.1-201ENST00000424448 303 ntBASIC16.32■□□□□ 0.2
COL20A1Q9P218 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 AC098935.1-201ENST00000446057 611 ntBASIC16.32■□□□□ 0.2
COL20A1Q9P218 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COL20A1Q9P218 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL20A1Q9P218 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 LINC00115-201ENST00000473798 1317 ntBASIC16.31■□□□□ 0.2
COL20A1Q9P218 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 AL627422.1-201ENST00000434104 580 ntBASIC16.31■□□□□ 0.2
COL20A1Q9P218 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 AC008267.1-201ENST00000474858 1069 ntBASIC16.31■□□□□ 0.2
COL20A1Q9P218 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 NPM1P43-201ENST00000558669 786 ntBASIC16.31■□□□□ 0.2
COL20A1Q9P218 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.31■□□□□ 0.2
COL20A1Q9P218 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL20A1Q9P218 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL20A1Q9P218 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL20A1Q9P218 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms