Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 AC007326.1-201ENST00000604539 458 ntBASIC14.38□□□□□ -0.11
HDAC8Q9BY41 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 BRD7P5-201ENST00000299197 1822 ntBASIC14.38□□□□□ -0.11
HDAC8Q9BY41 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 AC006480.2-201ENST00000609770 1337 ntBASIC14.38□□□□□ -0.11
HDAC8Q9BY41 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC8Q9BY41 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 MIR33B-201ENST00000385104 96 ntBASIC14.37□□□□□ -0.11
HDAC8Q9BY41 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 FGFR3P1-201ENST00000449999 601 ntBASIC14.37□□□□□ -0.11
HDAC8Q9BY41 NOC2LP1-201ENST00000450578 752 ntBASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 AC130709.1-201ENST00000484779 1212 ntBASIC14.37□□□□□ -0.11
HDAC8Q9BY41 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.37□□□□□ -0.11
HDAC8Q9BY41 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 AC015802.1-201ENST00000588104 1449 ntBASIC14.37□□□□□ -0.11
HDAC8Q9BY41 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDAC8Q9BY41 AC063926.3-201ENST00000624734 5658 ntBASIC14.37□□□□□ -0.11
HDAC8Q9BY41 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 DBET-201ENST00000630918 3363 ntBASIC14.36□□□□□ -0.11
HDAC8Q9BY41 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 LINC01815-202ENST00000641468 1409 ntBASIC14.36□□□□□ -0.11
HDAC8Q9BY41 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.36□□□□□ -0.11
HDAC8Q9BY41 FTH1P22-201ENST00000456305 520 ntBASIC14.36□□□□□ -0.11
HDAC8Q9BY41 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms