Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 OR8T1P-201ENST00000421347 918 ntBASIC15.32■□□□□ 0.04
SUSD3Q96L08 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SUSD3Q96L08 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 AC130709.1-201ENST00000484779 1212 ntBASIC15.32■□□□□ 0.04
SUSD3Q96L08 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 AC018635.2-201ENST00000608625 364 ntBASIC15.32■□□□□ 0.04
SUSD3Q96L08 AC073352.2-201ENST00000609385 439 ntBASIC15.32■□□□□ 0.04
SUSD3Q96L08 AL805961.1-201ENST00000642026 753 ntBASIC15.32■□□□□ 0.04
SUSD3Q96L08 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SUSD3Q96L08 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUSD3Q96L08 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUSD3Q96L08 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUSD3Q96L08 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.32■□□□□ 0.04
SUSD3Q96L08 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 MIR4522-201ENST00000584932 87 ntBASIC15.31■□□□□ 0.04
SUSD3Q96L08 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 AC074138.1-201ENST00000611182 1303 ntBASIC15.31■□□□□ 0.04
SUSD3Q96L08 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SUSD3Q96L08 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUSD3Q96L08 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SUSD3Q96L08 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SUSD3Q96L08 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 AP000356.3-201ENST00000382243 753 ntBASIC15.3■□□□□ 0.04
SUSD3Q96L08 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.3■□□□□ 0.04
SUSD3Q96L08 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 AC073869.2-201ENST00000417338 1026 ntBASIC15.3■□□□□ 0.04
SUSD3Q96L08 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 MPRIPP1-201ENST00000452433 1089 ntBASIC15.3■□□□□ 0.04
SUSD3Q96L08 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.3■□□□□ 0.04
SUSD3Q96L08 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
SUSD3Q96L08 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.3■□□□□ 0.04
SUSD3Q96L08 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUSD3Q96L08 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.3■□□□□ 0.04
SUSD3Q96L08 MIR3147-201ENST00000577811 66 ntBASIC15.3■□□□□ 0.04
SUSD3Q96L08 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms