Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1BQ8WW43 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
APH1BQ8WW43 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APH1BQ8WW43 CICP1-201ENST00000416803 2410 ntBASIC13.22□□□□□ -0.29
APH1BQ8WW43 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1BQ8WW43 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1BQ8WW43 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APH1BQ8WW43 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1BQ8WW43 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.22□□□□□ -0.29
APH1BQ8WW43 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1BQ8WW43 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1BQ8WW43 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1BQ8WW43 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
APH1BQ8WW43 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
APH1BQ8WW43 AL445250.1-201ENST00000641671 2259 ntBASIC13.22□□□□□ -0.29
APH1BQ8WW43 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.21□□□□□ -0.29
APH1BQ8WW43 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 AC009474.1-201ENST00000455096 1565 ntBASIC13.21□□□□□ -0.29
APH1BQ8WW43 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 MIR574-201ENST00000385209 96 ntBASIC13.21□□□□□ -0.29
APH1BQ8WW43 KLF2P2-201ENST00000416807 1039 ntBASIC13.21□□□□□ -0.29
APH1BQ8WW43 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APH1BQ8WW43 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 KRT18P8-201ENST00000581937 1246 ntBASIC13.21□□□□□ -0.29
APH1BQ8WW43 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.21□□□□□ -0.29
APH1BQ8WW43 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.21□□□□□ -0.29
APH1BQ8WW43 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
APH1BQ8WW43 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.21□□□□□ -0.3
APH1BQ8WW43 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APH1BQ8WW43 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.21□□□□□ -0.3
APH1BQ8WW43 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 AC114812.1-204ENST00000449669 728 ntBASIC13.2□□□□□ -0.3
APH1BQ8WW43 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APH1BQ8WW43 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.2□□□□□ -0.3
APH1BQ8WW43 AC027369.6-201ENST00000525520 931 ntBASIC13.2□□□□□ -0.3
APH1BQ8WW43 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms