Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 HSPA8P5-201ENST00000456928 2069 ntBASIC17.11■□□□□ 0.33
STAG1Q8WVM7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 AC139749.1-202ENST00000617529 3139 ntBASIC17.11■□□□□ 0.33
STAG1Q8WVM7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 CICP4-201ENST00000447359 2812 ntBASIC17.11■□□□□ 0.33
STAG1Q8WVM7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.11■□□□□ 0.33
STAG1Q8WVM7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 AL591471.1-201ENST00000621855 229 ntBASIC17.1■□□□□ 0.33
STAG1Q8WVM7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
STAG1Q8WVM7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.09■□□□□ 0.33
STAG1Q8WVM7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 AC106872.11-201ENST00000605838 421 ntBASIC17.09■□□□□ 0.33
STAG1Q8WVM7 AP001505.2-201ENST00000616815 443 ntBASIC17.09■□□□□ 0.33
STAG1Q8WVM7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 KRT8P21-201ENST00000430398 1491 ntBASIC17.09■□□□□ 0.33
STAG1Q8WVM7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 AP002353.1-201ENST00000528257 1599 ntBASIC17.09■□□□□ 0.33
STAG1Q8WVM7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms