Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 ACTG1P2-201ENST00000415776 1125 ntBASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 ACTG1P11-201ENST00000425411 1125 ntBASIC15.67■□□□□ 0.1
BEST2Q8NFU1 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AC105129.2-201ENST00000559536 390 ntBASIC15.67■□□□□ 0.1
BEST2Q8NFU1 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AP001505.2-201ENST00000616815 443 ntBASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AC091812.3-201ENST00000621362 345 ntBASIC15.67■□□□□ 0.1
BEST2Q8NFU1 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AC007686.3-201ENST00000619017 3487 ntBASIC15.67■□□□□ 0.1
BEST2Q8NFU1 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST2Q8NFU1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 KRT8P21-201ENST00000430398 1491 ntBASIC15.66■□□□□ 0.1
BEST2Q8NFU1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST2Q8NFU1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms