Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
NUP35Q8NFH5 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 FP325330.2-201ENST00000624219 5630 ntBASIC10.95□□□□□ -0.66
NUP35Q8NFH5 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 AC073869.1-201ENST00000415574 2762 ntBASIC10.95□□□□□ -0.66
NUP35Q8NFH5 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 Z98257.2-202ENST00000641138 1548 ntBASIC10.95□□□□□ -0.66
NUP35Q8NFH5 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 EMBP1-201ENST00000458200 901 ntBASIC10.95□□□□□ -0.66
NUP35Q8NFH5 AC093909.1-201ENST00000504731 1122 ntBASIC10.95□□□□□ -0.66
NUP35Q8NFH5 UNC93B7-201ENST00000509439 705 ntBASIC10.95□□□□□ -0.66
NUP35Q8NFH5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 KRT18P8-201ENST00000581937 1246 ntBASIC10.95□□□□□ -0.66
NUP35Q8NFH5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 AC055717.3-201ENST00000622967 595 ntBASIC10.95□□□□□ -0.66
NUP35Q8NFH5 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 SALL4P5-201ENST00000419001 1760 ntBASIC10.95□□□□□ -0.66
NUP35Q8NFH5 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.95□□□□□ -0.66
NUP35Q8NFH5 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NUP35Q8NFH5 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NUP35Q8NFH5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.94□□□□□ -0.66
NUP35Q8NFH5 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NUP35Q8NFH5 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
NUP35Q8NFH5 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC10.94□□□□□ -0.66
NUP35Q8NFH5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NUP35Q8NFH5 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
NUP35Q8NFH5 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NUP35Q8NFH5 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms