Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 AP002414.2-201ENST00000591780 3365 ntBASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 BCYRN1-201ENST00000418539 200 ntBASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 TSPY25P-201ENST00000429463 745 ntBASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 AC021016.3-201ENST00000608367 477 ntBASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 AP001505.2-201ENST00000616815 443 ntBASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 AC091544.8-201ENST00000619490 361 ntBASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 NAP1L6-202ENST00000641404 1222 ntBASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ARHGEF39Q8N4T4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AC020910.6-201ENST00000623084 1459 ntBASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 OR2I1P-209ENST00000641730 5365 ntBASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 MIR769-201ENST00000390225 118 ntBASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 PDIA3P2-201ENST00000428073 158 ntBASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms