Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AC232323.1-201ENST00000540724 2099 ntBASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AL133338.1-201ENST00000565695 1517 ntBASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 HIST2H2BC-201ENST00000498492 580 ntBASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 RCC2P8-201ENST00000502779 1035 ntBASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AC091544.8-201ENST00000619490 361 ntBASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 AHCYP4-201ENST00000419201 1315 ntBASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRRTM4Q86VH4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 TUBBP5-203ENST00000508529 1334 ntBASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms