Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
FOXR1Q6PIV2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXR1Q6PIV2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXR1Q6PIV2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
FOXR1Q6PIV2 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXR1Q6PIV2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXR1Q6PIV2 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXR1Q6PIV2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
FOXR1Q6PIV2 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 AC004945.1-201ENST00000416738 983 ntBASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 AC104989.1-201ENST00000519711 778 ntBASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 RN7SL219P-201ENST00000582872 296 ntBASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 AL136982.4-201ENST00000437689 1740 ntBASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 KRT8P22-201ENST00000562317 1415 ntBASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXR1Q6PIV2 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AC131902.2-201ENST00000566892 2172 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AL445209.1-201ENST00000607269 3491 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 FAM86MP-201ENST00000340703 885 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms