Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 AL390755.1-201ENST00000623716 2027 ntBASIC13.65□□□□□ -0.22
EFNA3P52797 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
EFNA3P52797 RN7SKP214-201ENST00000364208 315 ntBASIC13.65□□□□□ -0.22
EFNA3P52797 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
EFNA3P52797 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.65□□□□□ -0.22
EFNA3P52797 ISCA2P1-201ENST00000425548 448 ntBASIC13.65□□□□□ -0.22
EFNA3P52797 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.65□□□□□ -0.22
EFNA3P52797 XBP1P1-201ENST00000436573 652 ntBASIC13.65□□□□□ -0.22
EFNA3P52797 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.65□□□□□ -0.22
EFNA3P52797 AC011742.3-201ENST00000439053 820 ntBASIC13.65□□□□□ -0.22
EFNA3P52797 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.65□□□□□ -0.22
EFNA3P52797 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.65□□□□□ -0.22
EFNA3P52797 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.65□□□□□ -0.22
EFNA3P52797 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.65□□□□□ -0.22
EFNA3P52797 AC105129.2-201ENST00000559536 390 ntBASIC13.65□□□□□ -0.22
EFNA3P52797 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
EFNA3P52797 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.65□□□□□ -0.22
EFNA3P52797 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.65□□□□□ -0.22
EFNA3P52797 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.65□□□□□ -0.22
EFNA3P52797 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
EFNA3P52797 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.65□□□□□ -0.22
EFNA3P52797 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
EFNA3P52797 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
EFNA3P52797 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
EFNA3P52797 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
EFNA3P52797 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
EFNA3P52797 AC007686.3-201ENST00000619017 3487 ntBASIC13.65□□□□□ -0.23
EFNA3P52797 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.65□□□□□ -0.23
EFNA3P52797 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
EFNA3P52797 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.64□□□□□ -0.23
EFNA3P52797 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
EFNA3P52797 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
EFNA3P52797 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.64□□□□□ -0.23
EFNA3P52797 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.64□□□□□ -0.23
EFNA3P52797 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.64□□□□□ -0.23
EFNA3P52797 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.64□□□□□ -0.23
EFNA3P52797 ST13P19-201ENST00000442505 1124 ntBASIC13.64□□□□□ -0.23
EFNA3P52797 IMP3P2-201ENST00000489760 475 ntBASIC13.64□□□□□ -0.23
EFNA3P52797 AC022447.6-201ENST00000515522 438 ntBASIC13.64□□□□□ -0.23
EFNA3P52797 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.64□□□□□ -0.23
EFNA3P52797 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
EFNA3P52797 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.64□□□□□ -0.23
EFNA3P52797 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.64□□□□□ -0.23
EFNA3P52797 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.64□□□□□ -0.23
EFNA3P52797 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 AL136295.7-201ENST00000619226 1200 ntBASIC13.64□□□□□ -0.23
EFNA3P52797 AC091544.8-201ENST00000619490 361 ntBASIC13.64□□□□□ -0.23
EFNA3P52797 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.64□□□□□ -0.23
EFNA3P52797 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
EFNA3P52797 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.64□□□□□ -0.23
EFNA3P52797 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
EFNA3P52797 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.64□□□□□ -0.23
EFNA3P52797 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
EFNA3P52797 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
EFNA3P52797 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
EFNA3P52797 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms