Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
ATF3P18847 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.63■□□□□ 0.73
ATF3P18847 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.63■□□□□ 0.73
ATF3P18847 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ATF3P18847 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATF3P18847 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ATF3P18847 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC19.63■□□□□ 0.73
ATF3P18847 AC113347.2-201ENST00000512350 279 ntBASIC19.63■□□□□ 0.73
ATF3P18847 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC19.63■□□□□ 0.73
ATF3P18847 CMC2-204ENST00000562713 573 ntTSL 3 BASIC19.63■□□□□ 0.73
ATF3P18847 CMC2-209ENST00000565108 399 ntTSL 2 BASIC19.63■□□□□ 0.73
ATF3P18847 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC19.63■□□□□ 0.73
ATF3P18847 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.63■□□□□ 0.73
ATF3P18847 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.63■□□□□ 0.73
ATF3P18847 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF3P18847 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ATF3P18847 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.62■□□□□ 0.73
ATF3P18847 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.62■□□□□ 0.73
ATF3P18847 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.62■□□□□ 0.73
ATF3P18847 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC19.62■□□□□ 0.73
ATF3P18847 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.62■□□□□ 0.73
ATF3P18847 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 SSR4-202ENST00000370085 526 ntTSL 2 BASIC19.62■□□□□ 0.73
ATF3P18847 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC19.62■□□□□ 0.73
ATF3P18847 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATF3P18847 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATF3P18847 AC010900.1-201ENST00000449849 1296 ntBASIC19.62■□□□□ 0.73
ATF3P18847 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC19.62■□□□□ 0.73
ATF3P18847 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC19.62■□□□□ 0.73
ATF3P18847 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC19.62■□□□□ 0.73
ATF3P18847 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ATF3P18847 AC020904.3-201ENST00000624199 442 ntBASIC19.62■□□□□ 0.73
ATF3P18847 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ATF3P18847 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATF3P18847 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC19.62■□□□□ 0.73
ATF3P18847 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.62■□□□□ 0.73
ATF3P18847 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.62■□□□□ 0.73
ATF3P18847 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATF3P18847 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
ATF3P18847 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATF3P18847 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATF3P18847 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATF3P18847 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATF3P18847 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC19.61■□□□□ 0.73
ATF3P18847 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 CCL25-202ENST00000315626 450 ntTSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC19.61■□□□□ 0.73
ATF3P18847 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 LINP1-201ENST00000417112 917 ntTSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 MAGEA7P-201ENST00000436482 942 ntBASIC19.61■□□□□ 0.73
ATF3P18847 RHOQP2-201ENST00000449922 579 ntBASIC19.61■□□□□ 0.73
ATF3P18847 RN7SL351P-201ENST00000469306 248 ntBASIC19.61■□□□□ 0.73
ATF3P18847 RN7SL605P-201ENST00000577229 281 ntBASIC19.61■□□□□ 0.73
ATF3P18847 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC19.61■□□□□ 0.73
ATF3P18847 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC19.61■□□□□ 0.73
ATF3P18847 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC19.61■□□□□ 0.73
ATF3P18847 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC19.61■□□□□ 0.73
ATF3P18847 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ATF3P18847 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATF3P18847 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.61■□□□□ 0.73
ATF3P18847 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
ATF3P18847 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms