Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMC3P17980 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.29■□□□□ 0.04
PSMC3P17980 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMC3P17980 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMC3P17980 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMC3P17980 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMC3P17980 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PSMC3P17980 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMC3P17980 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMC3P17980 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMC3P17980 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMC3P17980 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMC3P17980 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PSMC3P17980 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMC3P17980 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PSMC3P17980 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMC3P17980 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMC3P17980 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMC3P17980 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PSMC3P17980 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PSMC3P17980 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMC3P17980 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMC3P17980 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PSMC3P17980 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMC3P17980 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 AL390755.1-201ENST00000623716 2027 ntBASIC15.28■□□□□ 0.04
PSMC3P17980 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 AL035414.1-201ENST00000451327 857 ntBASIC15.28■□□□□ 0.04
PSMC3P17980 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.28■□□□□ 0.04
PSMC3P17980 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.28■□□□□ 0.04
PSMC3P17980 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMC3P17980 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.28■□□□□ 0.04
PSMC3P17980 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
PSMC3P17980 AC073352.2-201ENST00000609385 439 ntBASIC15.28■□□□□ 0.04
PSMC3P17980 COX6A1P2-201ENST00000620597 330 ntBASIC15.28■□□□□ 0.04
PSMC3P17980 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PSMC3P17980 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PSMC3P17980 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 SALL4P5-201ENST00000419001 1760 ntBASIC15.28■□□□□ 0.04
PSMC3P17980 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMC3P17980 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMC3P17980 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PSMC3P17980 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMC3P17980 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMC3P17980 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PSMC3P17980 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMC3P17980 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMC3P17980 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
PSMC3P17980 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMC3P17980 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.27■□□□□ 0.04
PSMC3P17980 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMC3P17980 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMC3P17980 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PSMC3P17980 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMC3P17980 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMC3P17980 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMC3P17980 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMC3P17980 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMC3P17980 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PSMC3P17980 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms