Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC15.47■□□□□ 0.07
TIMP1P01033 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.47■□□□□ 0.07
TIMP1P01033 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.47■□□□□ 0.07
TIMP1P01033 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.47■□□□□ 0.07
TIMP1P01033 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TIMP1P01033 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TIMP1P01033 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TIMP1P01033 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TIMP1P01033 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TIMP1P01033 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.47■□□□□ 0.07
TIMP1P01033 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TIMP1P01033 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.47■□□□□ 0.07
TIMP1P01033 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TIMP1P01033 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TIMP1P01033 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TIMP1P01033 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 LINC00115-201ENST00000473798 1317 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.46■□□□□ 0.07
TIMP1P01033 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.46■□□□□ 0.07
TIMP1P01033 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.46■□□□□ 0.07
TIMP1P01033 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.46■□□□□ 0.07
TIMP1P01033 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.46■□□□□ 0.07
TIMP1P01033 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.46■□□□□ 0.07
TIMP1P01033 AC106827.1-201ENST00000366454 431 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TIMP1P01033 AC004522.1-201ENST00000419978 654 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 AC104961.1-201ENST00000427605 771 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 NRADDP-201ENST00000437305 691 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.46■□□□□ 0.07
TIMP1P01033 AC092903.1-201ENST00000466506 262 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 BCL2L12P1-201ENST00000508390 733 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.46■□□□□ 0.07
TIMP1P01033 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TIMP1P01033 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TIMP1P01033 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TIMP1P01033 AL136982.5-201ENST00000605222 294 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 AC073869.4-201ENST00000620841 800 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 AC005274.1-201ENST00000623460 802 ntBASIC15.46■□□□□ 0.07
TIMP1P01033 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.46■□□□□ 0.07
TIMP1P01033 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TIMP1P01033 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC15.46■□□□□ 0.07
TIMP1P01033 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.46■□□□□ 0.07
TIMP1P01033 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC15.46■□□□□ 0.07
TIMP1P01033 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TIMP1P01033 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TIMP1P01033 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TIMP1P01033 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TIMP1P01033 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
TIMP1P01033 AC084018.2-201ENST00000613093 2607 ntBASIC15.46■□□□□ 0.06
TIMP1P01033 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TIMP1P01033 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.45■□□□□ 0.06
TIMP1P01033 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TIMP1P01033 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TIMP1P01033 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 AL118508.1-201ENST00000613502 2345 ntBASIC15.45■□□□□ 0.06
TIMP1P01033 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TIMP1P01033 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 CTSL-202ENST00000342020 933 ntTSL 2 BASIC15.45■□□□□ 0.06
TIMP1P01033 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 AC073210.1-201ENST00000414799 232 ntBASIC15.45■□□□□ 0.06
TIMP1P01033 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TIMP1P01033 HNRNPA1P42-201ENST00000458678 957 ntBASIC15.45■□□□□ 0.06
TIMP1P01033 AC093300.1-201ENST00000510368 1201 ntBASIC15.45■□□□□ 0.06
TIMP1P01033 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.45■□□□□ 0.06
TIMP1P01033 MED11-202ENST00000573708 802 ntTSL 2 BASIC15.45■□□□□ 0.06
TIMP1P01033 RN7SL556P-201ENST00000582856 298 ntBASIC15.45■□□□□ 0.06
TIMP1P01033 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC15.45■□□□□ 0.06
TIMP1P01033 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.45■□□□□ 0.06
TIMP1P01033 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 AC011462.4-201ENST00000616866 449 ntBASIC15.45■□□□□ 0.06
TIMP1P01033 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.45■□□□□ 0.06
TIMP1P01033 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.45■□□□□ 0.06
TIMP1P01033 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.45■□□□□ 0.06
TIMP1P01033 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TIMP1P01033 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TIMP1P01033 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms