Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC004461.1-201ENST00000412461 403 ntBASIC11.98□□□□□ -0.49
SSSCA1O60232 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.98□□□□□ -0.49
SSSCA1O60232 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.98□□□□□ -0.49
SSSCA1O60232 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.98□□□□□ -0.49
SSSCA1O60232 GAPDHP40-201ENST00000505218 1006 ntBASIC11.98□□□□□ -0.49
SSSCA1O60232 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 SDHAP3-202ENST00000515467 728 ntBASIC11.98□□□□□ -0.49
SSSCA1O60232 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.98□□□□□ -0.49
SSSCA1O60232 AC010336.2-201ENST00000564226 506 ntBASIC11.98□□□□□ -0.49
SSSCA1O60232 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.98□□□□□ -0.49
SSSCA1O60232 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SSSCA1O60232 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.98□□□□□ -0.49
SSSCA1O60232 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.98□□□□□ -0.49
SSSCA1O60232 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SSSCA1O60232 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.98□□□□□ -0.49
SSSCA1O60232 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.98□□□□□ -0.49
SSSCA1O60232 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SSSCA1O60232 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.98□□□□□ -0.49
SSSCA1O60232 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSSCA1O60232 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 AL118506.1-201ENST00000601296 3082 ntBASIC11.97□□□□□ -0.49
SSSCA1O60232 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.97□□□□□ -0.49
SSSCA1O60232 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.97□□□□□ -0.49
SSSCA1O60232 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SSSCA1O60232 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SSSCA1O60232 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SSSCA1O60232 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.97□□□□□ -0.49
SSSCA1O60232 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.97□□□□□ -0.49
SSSCA1O60232 AC007969.1-201ENST00000433675 447 ntBASIC11.97□□□□□ -0.49
SSSCA1O60232 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SSSCA1O60232 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.97□□□□□ -0.49
SSSCA1O60232 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.97□□□□□ -0.49
SSSCA1O60232 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.97□□□□□ -0.49
SSSCA1O60232 TIMM17BP1-201ENST00000545713 516 ntBASIC11.97□□□□□ -0.49
SSSCA1O60232 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.97□□□□□ -0.49
SSSCA1O60232 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.97□□□□□ -0.49
SSSCA1O60232 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SSSCA1O60232 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SSSCA1O60232 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
SSSCA1O60232 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SSSCA1O60232 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.97□□□□□ -0.49
SSSCA1O60232 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSSCA1O60232 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
SSSCA1O60232 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.96□□□□□ -0.49
SSSCA1O60232 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
SSSCA1O60232 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms