Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HFM1A2PYH4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 AL627422.1-201ENST00000434104 580 ntBASIC21.17■□□□□ 0.98
HFM1A2PYH4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 AL021707.6-201ENST00000609212 491 ntBASIC21.17■□□□□ 0.98
HFM1A2PYH4 AC073352.2-201ENST00000609385 439 ntBASIC21.17■□□□□ 0.98
HFM1A2PYH4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 API5-208ENST00000531273 1868 ntTSL 2 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 KRT8P18-201ENST00000413425 1445 ntBASIC21.17■□□□□ 0.98
HFM1A2PYH4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HFM1A2PYH4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
HFM1A2PYH4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 AC006987.1-201ENST00000413610 527 ntBASIC21.16■□□□□ 0.98
HFM1A2PYH4 HMGA1P1-201ENST00000415560 1062 ntBASIC21.16■□□□□ 0.98
HFM1A2PYH4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 RN7SL555P-201ENST00000584742 339 ntBASIC21.16■□□□□ 0.98
HFM1A2PYH4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 AC103810.10-201ENST00000606504 343 ntBASIC21.16■□□□□ 0.98
HFM1A2PYH4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 AC068760.1-201ENST00000493579 1953 ntBASIC21.16■□□□□ 0.98
HFM1A2PYH4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HFM1A2PYH4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HFM1A2PYH4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 IQSEC3P1-201ENST00000538799 536 ntBASIC21.15■□□□□ 0.98
HFM1A2PYH4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 MIR2392-201ENST00000584881 84 ntBASIC21.15■□□□□ 0.98
HFM1A2PYH4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC21.15■□□□□ 0.98
HFM1A2PYH4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 AC005089.1-201ENST00000619486 2241 ntBASIC21.15■□□□□ 0.98
HFM1A2PYH4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HFM1A2PYH4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms