Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC187A0A096LP49 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 BAK1P1-201ENST00000317045 636 ntBASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 AL512306.1-201ENST00000432698 848 ntBASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 MIR6756-201ENST00000616240 63 ntBASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCDC187A0A096LP49 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCDC187A0A096LP49 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CCDC187A0A096LP49 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.77□□□□□ -0.2
CCDC187A0A096LP49 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CCDC187A0A096LP49 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCDC187A0A096LP49 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCDC187A0A096LP49 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 KRT18P66-201ENST00000452970 1269 ntBASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 CR383656.3-201ENST00000551315 183 ntBASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 AC127024.7-201ENST00000625101 200 ntBASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms