Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 COX5BP8-201ENST00000416911 349 ntBASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AC016694.1-201ENST00000434179 700 ntBASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AC234783.1-201ENST00000441761 496 ntBASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 GAPDHP21-201ENST00000450301 1010 ntBASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 SLC25A47P1-201ENST00000531577 414 ntBASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 AC018665.1-201ENST00000622927 1362 ntBASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 CSPG4P11-201ENST00000560634 4910 ntBASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 HLA-K-203ENST00000430151 1046 ntBASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 AC007969.1-201ENST00000433675 447 ntBASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
LINC00474Q9P2X8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms