Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 ACTG1P14-201ENST00000446382 1122 ntBASIC11.16□□□□□ -0.62
AP1S3Q96PC3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 RPL13AP23-201ENST00000480739 586 ntBASIC11.16□□□□□ -0.62
AP1S3Q96PC3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 AC105021.1-202ENST00000570572 669 ntBASIC11.16□□□□□ -0.62
AP1S3Q96PC3 MIR497HG-202ENST00000572453 3838 ntBASIC11.16□□□□□ -0.62
AP1S3Q96PC3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 AC027601.4-201ENST00000611259 610 ntBASIC11.16□□□□□ -0.62
AP1S3Q96PC3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 AC092902.6-201ENST00000641783 218 ntBASIC11.16□□□□□ -0.62
AP1S3Q96PC3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 AC018442.1-201ENST00000421439 2061 ntBASIC11.16□□□□□ -0.62
AP1S3Q96PC3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 AC011474.4-201ENST00000623523 2076 ntBASIC11.16□□□□□ -0.62
AP1S3Q96PC3 MST1P2-201ENST00000457982 2291 ntBASIC11.16□□□□□ -0.62
AP1S3Q96PC3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 TARDBPP1-201ENST00000442013 1203 ntBASIC11.15□□□□□ -0.62
AP1S3Q96PC3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 KRT18P3-201ENST00000451602 1288 ntBASIC11.15□□□□□ -0.62
AP1S3Q96PC3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 KRT8P48-201ENST00000515599 1220 ntBASIC11.15□□□□□ -0.62
AP1S3Q96PC3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 LINC01225-203ENST00000563550 1244 ntBASIC11.15□□□□□ -0.62
AP1S3Q96PC3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.15□□□□□ -0.62
AP1S3Q96PC3 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
AP1S3Q96PC3 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
AP1S3Q96PC3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.15□□□□□ -0.63
AP1S3Q96PC3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
AP1S3Q96PC3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
AP1S3Q96PC3 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.15□□□□□ -0.63
AP1S3Q96PC3 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms