Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 OR52M2P-201ENST00000414298 959 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 PGAM1P11-201ENST00000416729 680 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 RHOQP2-201ENST00000449922 579 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AC091304.3-201ENST00000566500 716 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CCDC168Q8NDH2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 SNORA57-201ENST00000383870 149 ntBASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 FDPSP7-201ENST00000429043 1054 ntBASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AC078814.4-201ENST00000546650 327 ntBASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AC079414.2-201ENST00000567157 1104 ntBASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 CSTP2-201ENST00000610599 398 ntBASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AC006986.1-201ENST00000612764 241 ntBASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.08□□□□□ -0.48
CCDC168Q8NDH2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 BRD7P5-201ENST00000299197 1822 ntBASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 AC024909.3-201ENST00000611513 2257 ntBASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 AL136172.1-201ENST00000598590 1394 ntBASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC168Q8NDH2 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms