Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RP1L1Q8IWN7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RP1L1Q8IWN7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RP1L1Q8IWN7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RP1L1Q8IWN7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.31□□□□□ -0.28
RP1L1Q8IWN7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 LINC01165-201ENST00000445190 1623 ntBASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AC006504.5-208ENST00000588784 2401 ntBASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AC239868.1-201ENST00000369385 493 ntBASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AC026410.1-201ENST00000507366 1101 ntBASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RP1L1Q8IWN7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 NDUFS6P1-201ENST00000485187 316 ntBASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 COX20P1-201ENST00000366529 357 ntBASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 AL583805.1-201ENST00000391389 531 ntBASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RP1L1Q8IWN7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms