Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FGFR3P1-201ENST00000449999 601 ntBASIC16.28■□□□□ 0.2
TRIM50Q86XT4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 POU5F1P2-201ENST00000521750 823 ntBASIC16.28■□□□□ 0.2
TRIM50Q86XT4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 AC006480.2-201ENST00000609770 1337 ntBASIC16.27■□□□□ 0.2
TRIM50Q86XT4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 RPS2P36-201ENST00000456516 831 ntBASIC16.27■□□□□ 0.2
TRIM50Q86XT4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 MIR4722-201ENST00000578292 60 ntBASIC16.27■□□□□ 0.2
TRIM50Q86XT4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM50Q86XT4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM50Q86XT4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 MTHFR-210ENST00000641407 2387 ntBASIC16.26■□□□□ 0.19
TRIM50Q86XT4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 RNA5SP359-201ENST00000364838 113 ntBASIC16.26■□□□□ 0.19
TRIM50Q86XT4 TSPY25P-201ENST00000429463 745 ntBASIC16.26■□□□□ 0.19
TRIM50Q86XT4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 RN7SL67P-201ENST00000492147 296 ntBASIC16.26■□□□□ 0.19
TRIM50Q86XT4 AC019193.1-201ENST00000506678 823 ntBASIC16.26■□□□□ 0.19
TRIM50Q86XT4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 AC104640.1-201ENST00000562617 2109 ntBASIC16.26■□□□□ 0.19
TRIM50Q86XT4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 AC026803.1-201ENST00000569130 274 ntBASIC16.26■□□□□ 0.19
TRIM50Q86XT4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 AL353726.2-201ENST00000623259 884 ntBASIC16.26■□□□□ 0.19
TRIM50Q86XT4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
TRIM50Q86XT4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms