Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 PNN-202ENST00000553331 656 ntTSL 3 BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 AC114341.1-201ENST00000618070 349 ntBASIC10.96□□□□□ -0.65
HIST1H2BDP58876 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 TMEM191A-211ENST00000637163 1067 ntBASIC10.96□□□□□ -0.65
HIST1H2BDP58876 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC10.96□□□□□ -0.65
HIST1H2BDP58876 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
HIST1H2BDP58876 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 CRAT-202ENST00000393384 973 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 MINOS1P3-201ENST00000457048 203 ntBASIC10.95□□□□□ -0.66
HIST1H2BDP58876 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 FP325332.1-201ENST00000624818 2045 ntBASIC10.95□□□□□ -0.66
HIST1H2BDP58876 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SARS-202ENST00000369923 1882 ntTSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 CTAGE13P-201ENST00000416709 2446 ntBASIC10.95□□□□□ -0.66
HIST1H2BDP58876 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC10.95□□□□□ -0.66
HIST1H2BDP58876 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms