RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
PRKCQ-203ENST00000539722 HRCP23327 699 aa20.78■□□□□ 0.92
PRKCQ-203ENST00000539722 PPARGC1BQ86YN6 1023 aaKnown RBP20.64■□□□□ 0.89
PRKCQ-203ENST00000539722 PCGF6Q9BYE7 350 aa20.48■□□□□ 0.87
PRKCQ-203ENST00000539722 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
PRKCQ-203ENST00000539722 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
PRKCQ-203ENST00000539722 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
PRKCQ-203ENST00000539722 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
PRKCQ-203ENST00000539722 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
PRKCQ-203ENST00000539722 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.77
PRKCQ-203ENST00000539722 LOC105371045A0A1W2PR82 267 aa19.68■□□□□ 0.74
PRKCQ-203ENST00000539722 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
PRKCQ-203ENST00000539722 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
PRKCQ-203ENST00000539722 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
PRKCQ-203ENST00000539722 ZEB1P37275 1124 aaPredicted RBP19.29■□□□□ 0.68
PRKCQ-203ENST00000539722 MYT1Q01538 1121 aa19.29■□□□□ 0.68
PRKCQ-203ENST00000539722 ACIN1Q9UKV3 1341 aaKnown RBP19.24■□□□□ 0.67
PRKCQ-203ENST00000539722 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
PRKCQ-203ENST00000539722 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
PRKCQ-203ENST00000539722 DCAF8L2P0C7V8 631 aa19.12■□□□□ 0.65
PRKCQ-203ENST00000539722 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
PRKCQ-203ENST00000539722 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
PRKCQ-203ENST00000539722 CENPBP07199 599 aaPredicted RBP18.94■□□□□ 0.62
PRKCQ-203ENST00000539722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
PRKCQ-203ENST00000539722 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
PRKCQ-203ENST00000539722 DIEXFQ68CQ4 756 aaKnown RBP18.87■□□□□ 0.61
PRKCQ-203ENST00000539722 YTHDC1Q96MU7 727 aaKnown RBP18.84■□□□□ 0.61
PRKCQ-203ENST00000539722 CCER1Q8TC90 406 aaPredicted RBP18.82■□□□□ 0.6
PRKCQ-203ENST00000539722 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
PRKCQ-203ENST00000539722 TTBK1Q5TCY1 1321 aaPredicted RBP18.64■□□□□ 0.57
PRKCQ-203ENST00000539722 MIER1Q8N108 512 aa18.42■□□□□ 0.54
PRKCQ-203ENST00000539722 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
PRKCQ-203ENST00000539722 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
PRKCQ-203ENST00000539722 ANP32EQ9BTT0 268 aa18.22■□□□□ 0.51
PRKCQ-203ENST00000539722 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
PRKCQ-203ENST00000539722 SUPT16HQ9Y5B9 1047 aaKnown RBP18.16■□□□□ 0.5
PRKCQ-203ENST00000539722 TSHZ2Q9NRE2 1034 aa18.14■□□□□ 0.49
PRKCQ-203ENST00000539722 RB1CC1Q8TDY2 1594 aa18.09■□□□□ 0.49
PRKCQ-203ENST00000539722 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
PRKCQ-203ENST00000539722 HNRNPUL2Q1KMD3 747 aaKnown RBP18.02■□□□□ 0.48
PRKCQ-203ENST00000539722 BCANQ96GW7 911 aa18.01■□□□□ 0.47
PRKCQ-203ENST00000539722 ABCC9O60706 1549 aa17.98■□□□□ 0.47
PRKCQ-203ENST00000539722 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
PRKCQ-203ENST00000539722 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.43
PRKCQ-203ENST00000539722 KCNH8Q96L42 1107 aa17.77■□□□□ 0.43
PRKCQ-203ENST00000539722 PRKCSHP14314 528 aaPredicted RBP17.76■□□□□ 0.43
PRKCQ-203ENST00000539722 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
PRKCQ-203ENST00000539722 SCRIBQ14160 1630 aa17.74■□□□□ 0.43
PRKCQ-203ENST00000539722 FKBP8Q14318 412 aa17.73■□□□□ 0.43
PRKCQ-203ENST00000539722 WRNQ14191 1432 aaPredicted RBP eCLIP17.73■□□□□ 0.43
PRKCQ-203ENST00000539722 RBM19Q9Y4C8 960 aaKnown RBP17.71■□□□□ 0.43
PRKCQ-203ENST00000539722 ITGAEP38570 1179 aa17.7■□□□□ 0.42
PRKCQ-203ENST00000539722 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
PRKCQ-203ENST00000539722 MSH5O43196 834 aa17.6■□□□□ 0.41
PRKCQ-203ENST00000539722 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
PRKCQ-203ENST00000539722 SOGA1O94964 1423 aa17.57■□□□□ 0.4
PRKCQ-203ENST00000539722 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
PRKCQ-203ENST00000539722 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
PRKCQ-203ENST00000539722 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
PRKCQ-203ENST00000539722 MROH2BQ7Z745 1585 aa17.5■□□□□ 0.39
PRKCQ-203ENST00000539722 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
PRKCQ-203ENST00000539722 NEFLP07196 543 aa17.48■□□□□ 0.39
PRKCQ-203ENST00000539722 ERICH6Q7L0X2 663 aa17.48■□□□□ 0.39
PRKCQ-203ENST00000539722 WIZO95785 1651 aa17.47■□□□□ 0.39
PRKCQ-203ENST00000539722 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
PRKCQ-203ENST00000539722 APLP2Q06481 763 aa17.45■□□□□ 0.38
PRKCQ-203ENST00000539722 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
PRKCQ-203ENST00000539722 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
PRKCQ-203ENST00000539722 IRX6P78412 446 aaPredicted RBP17.38■□□□□ 0.37
PRKCQ-203ENST00000539722 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
PRKCQ-203ENST00000539722 DEKP35659 375 aaKnown RBP17.34■□□□□ 0.37
PRKCQ-203ENST00000539722 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
PRKCQ-203ENST00000539722 GOLGA3Q08378 1498 aa17.29■□□□□ 0.36
PRKCQ-203ENST00000539722 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
PRKCQ-203ENST00000539722 CLIP1P30622 1438 aa17.28■□□□□ 0.36
PRKCQ-203ENST00000539722 NBR1Q14596 966 aa17.25■□□□□ 0.35
PRKCQ-203ENST00000539722 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
PRKCQ-203ENST00000539722 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.35
PRKCQ-203ENST00000539722 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
PRKCQ-203ENST00000539722 CCDC136Q96JN2 1154 aa17.19■□□□□ 0.34
PRKCQ-203ENST00000539722 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
PRKCQ-203ENST00000539722 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
PRKCQ-203ENST00000539722 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
PRKCQ-203ENST00000539722 EEA1Q15075 1411 aa17.14■□□□□ 0.33
PRKCQ-203ENST00000539722 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
PRKCQ-203ENST00000539722 SIN3AQ96ST3 1273 aa17.11■□□□□ 0.33
PRKCQ-203ENST00000539722 ANP32CO43423 234 aa17.1■□□□□ 0.33
PRKCQ-203ENST00000539722 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.32
PRKCQ-203ENST00000539722 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
PRKCQ-203ENST00000539722 NACADO15069 1562 aa17.06■□□□□ 0.32
PRKCQ-203ENST00000539722 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
PRKCQ-203ENST00000539722 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
PRKCQ-203ENST00000539722 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.04■□□□□ 0.32
PRKCQ-203ENST00000539722 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
PRKCQ-203ENST00000539722 IL27Q8NEV9 243 aa17.03■□□□□ 0.32
PRKCQ-203ENST00000539722 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
PRKCQ-203ENST00000539722 MYT1LQ9UL68 1186 aa17.01■□□□□ 0.31
PRKCQ-203ENST00000539722 KIF21BO75037 1637 aa17■□□□□ 0.31
PRKCQ-203ENST00000539722 NOP58Q9Y2X3 529 aaKnown RBP17■□□□□ 0.31
PRKCQ-203ENST00000539722 WDR97A6NE52 1622 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms