Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
CDH4P55283 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
CDH4P55283 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 AL133338.1-201ENST00000565695 1517 ntBASIC14.9□□□□□ -0.02
CDH4P55283 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH4P55283 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 AC097359.2-201ENST00000604992 2389 ntBASIC14.9□□□□□ -0.02
CDH4P55283 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 AC011498.7-201ENST00000624986 2027 ntBASIC14.9□□□□□ -0.02
CDH4P55283 AL157791.1-201ENST00000553667 1699 ntBASIC14.9□□□□□ -0.02
CDH4P55283 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH4P55283 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDH4P55283 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH4P55283 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH4P55283 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDH4P55283 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 OR2I1P-210ENST00000642037 4691 ntBASIC14.89□□□□□ -0.03
CDH4P55283 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH4P55283 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH4P55283 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH4P55283 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH4P55283 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDH4P55283 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDH4P55283 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.89□□□□□ -0.03
CDH4P55283 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 OR2R1P-201ENST00000441404 914 ntBASIC14.89□□□□□ -0.03
CDH4P55283 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.89□□□□□ -0.03
CDH4P55283 AC005077.2-201ENST00000449786 690 ntBASIC14.89□□□□□ -0.03
CDH4P55283 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.89□□□□□ -0.03
CDH4P55283 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
CDH4P55283 ACTG1P17-201ENST00000558391 1119 ntBASIC14.89□□□□□ -0.03
CDH4P55283 RN7SL774P-201ENST00000577467 290 ntBASIC14.89□□□□□ -0.03
CDH4P55283 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH4P55283 AL157813.1-201ENST00000612996 587 ntBASIC14.89□□□□□ -0.03
CDH4P55283 NAP1L6-202ENST00000641404 1222 ntBASIC14.89□□□□□ -0.03
CDH4P55283 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
CDH4P55283 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDH4P55283 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH4P55283 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH4P55283 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH4P55283 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH4P55283 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH4P55283 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 AC099063.4-201ENST00000641099 1602 ntBASIC14.88□□□□□ -0.03
CDH4P55283 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDH4P55283 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH4P55283 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 MIR769-201ENST00000390225 118 ntBASIC14.88□□□□□ -0.03
CDH4P55283 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDH4P55283 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.88□□□□□ -0.03
CDH4P55283 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 AL591471.1-201ENST00000621855 229 ntBASIC14.88□□□□□ -0.03
CDH4P55283 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms