Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.56■□□□□ 0.4
NCLP19338 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.56■□□□□ 0.4
NCLP19338 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NCLP19338 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 AL360270.3-201ENST00000609118 1348 ntBASIC17.56■□□□□ 0.4
NCLP19338 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.56■□□□□ 0.4
NCLP19338 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NCLP19338 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NCLP19338 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
NCLP19338 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NCLP19338 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NCLP19338 SDHAP3-202ENST00000515467 728 ntBASIC17.56■□□□□ 0.4
NCLP19338 AP005018.1-201ENST00000525475 301 ntBASIC17.56■□□□□ 0.4
NCLP19338 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 AC027307.3-201ENST00000594262 1100 ntBASIC17.56■□□□□ 0.4
NCLP19338 AC012645.4-201ENST00000610691 1061 ntBASIC17.56■□□□□ 0.4
NCLP19338 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NCLP19338 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.56■□□□□ 0.4
NCLP19338 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCLP19338 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.55■□□□□ 0.4
NCLP19338 PPT1-213ENST00000641319 2388 ntBASIC17.55■□□□□ 0.4
NCLP19338 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.55■□□□□ 0.4
NCLP19338 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.55■□□□□ 0.4
NCLP19338 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.55■□□□□ 0.4
NCLP19338 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 AC073869.1-201ENST00000415574 2762 ntBASIC17.55■□□□□ 0.4
NCLP19338 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.55■□□□□ 0.4
NCLP19338 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.55■□□□□ 0.4
NCLP19338 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.55■□□□□ 0.4
NCLP19338 AC022447.6-201ENST00000515522 438 ntBASIC17.55■□□□□ 0.4
NCLP19338 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.55■□□□□ 0.4
NCLP19338 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.55■□□□□ 0.4
NCLP19338 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.55■□□□□ 0.4
NCLP19338 AC044860.1-202ENST00000559481 777 ntBASIC17.55■□□□□ 0.4
NCLP19338 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.55■□□□□ 0.4
NCLP19338 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC17.55■□□□□ 0.4
NCLP19338 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC17.55■□□□□ 0.4
NCLP19338 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCLP19338 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC17.55■□□□□ 0.4
NCLP19338 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.54■□□□□ 0.4
NCLP19338 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC17.54■□□□□ 0.4
NCLP19338 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms