Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 AC139749.1-202ENST00000617529 3139 ntBASIC12.59□□□□□ -0.39
GCM1Q9NP62 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GCM1Q9NP62 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.59□□□□□ -0.39
GCM1Q9NP62 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GCM1Q9NP62 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.58□□□□□ -0.39
GCM1Q9NP62 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GCM1Q9NP62 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
GCM1Q9NP62 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
GCM1Q9NP62 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.58□□□□□ -0.39
GCM1Q9NP62 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
GCM1Q9NP62 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 CHMP1AP1-201ENST00000445563 662 ntBASIC12.58□□□□□ -0.4
GCM1Q9NP62 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 GCOM2-201ENST00000509133 1104 ntBASIC12.58□□□□□ -0.4
GCM1Q9NP62 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 AC002472.3-201ENST00000640124 621 ntBASIC12.58□□□□□ -0.4
GCM1Q9NP62 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 TUBB1P2-201ENST00000422712 1306 ntBASIC12.58□□□□□ -0.4
GCM1Q9NP62 TUBB1P1-201ENST00000503144 1300 ntBASIC12.58□□□□□ -0.4
GCM1Q9NP62 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 AC007292.2-201ENST00000593524 1812 ntBASIC12.58□□□□□ -0.4
GCM1Q9NP62 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.58□□□□□ -0.4
GCM1Q9NP62 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GCM1Q9NP62 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.57□□□□□ -0.4
GCM1Q9NP62 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
GCM1Q9NP62 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 AL023775.1-201ENST00000454907 1746 ntBASIC12.57□□□□□ -0.4
GCM1Q9NP62 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
GCM1Q9NP62 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
GCM1Q9NP62 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GCM1Q9NP62 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms