Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 RN7SL48P-201ENST00000579283 293 ntBASIC15.52■□□□□ 0.08
CD248Q9HCU0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CD248Q9HCU0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CD248Q9HCU0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.52■□□□□ 0.07
CD248Q9HCU0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD248Q9HCU0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.52■□□□□ 0.07
CD248Q9HCU0 AC011474.4-201ENST00000623523 2076 ntBASIC15.52■□□□□ 0.07
CD248Q9HCU0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.52■□□□□ 0.07
CD248Q9HCU0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 MIR1202-201ENST00000408529 83 ntBASIC15.51■□□□□ 0.07
CD248Q9HCU0 RPSAP36-202ENST00000494591 1261 ntBASIC15.51■□□□□ 0.07
CD248Q9HCU0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 MIR4741-201ENST00000579822 90 ntBASIC15.51■□□□□ 0.07
CD248Q9HCU0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 AC084346.2-201ENST00000607097 949 ntBASIC15.51■□□□□ 0.07
CD248Q9HCU0 AL118558.3-201ENST00000607414 1079 ntBASIC15.51■□□□□ 0.07
CD248Q9HCU0 AC005695.3-201ENST00000614522 232 ntBASIC15.51■□□□□ 0.07
CD248Q9HCU0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CD248Q9HCU0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD248Q9HCU0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 AC126365.1-201ENST00000578585 1514 ntBASIC15.5■□□□□ 0.07
CD248Q9HCU0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 AC007969.1-201ENST00000433675 447 ntBASIC15.5■□□□□ 0.07
CD248Q9HCU0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 ECM1P1-201ENST00000604092 1279 ntBASIC15.5■□□□□ 0.07
CD248Q9HCU0 AL008638.5-201ENST00000623814 1298 ntBASIC15.5■□□□□ 0.07
CD248Q9HCU0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms