Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP50Q70EL3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.85■□□□□ 0.29
USP50Q70EL3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
USP50Q70EL3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP50Q70EL3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
USP50Q70EL3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
USP50Q70EL3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
USP50Q70EL3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.84■□□□□ 0.29
USP50Q70EL3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.84■□□□□ 0.29
USP50Q70EL3 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC16.84■□□□□ 0.29
USP50Q70EL3 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
USP50Q70EL3 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC16.84■□□□□ 0.29
USP50Q70EL3 SORD2P-201ENST00000558556 1069 ntBASIC16.84■□□□□ 0.29
USP50Q70EL3 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 RN7SL455P-201ENST00000580629 282 ntBASIC16.84■□□□□ 0.29
USP50Q70EL3 AC006116.2-201ENST00000589958 988 ntBASIC16.84■□□□□ 0.29
USP50Q70EL3 AC080013.5-201ENST00000607044 679 ntBASIC16.84■□□□□ 0.29
USP50Q70EL3 AC090510.3-201ENST00000615831 821 ntBASIC16.84■□□□□ 0.29
USP50Q70EL3 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.84■□□□□ 0.29
USP50Q70EL3 LINC00115-201ENST00000473798 1317 ntBASIC16.84■□□□□ 0.29
USP50Q70EL3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 AC117503.4-201ENST00000623229 1418 ntBASIC16.84■□□□□ 0.29
USP50Q70EL3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
USP50Q70EL3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP50Q70EL3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
USP50Q70EL3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
USP50Q70EL3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.83■□□□□ 0.28
USP50Q70EL3 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.83■□□□□ 0.28
USP50Q70EL3 RPL3P2-204ENST00000413027 1203 ntBASIC16.83■□□□□ 0.28
USP50Q70EL3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.83■□□□□ 0.28
USP50Q70EL3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC16.83■□□□□ 0.28
USP50Q70EL3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.83■□□□□ 0.28
USP50Q70EL3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC16.83■□□□□ 0.28
USP50Q70EL3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.83■□□□□ 0.28
USP50Q70EL3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.83■□□□□ 0.28
USP50Q70EL3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.83■□□□□ 0.28
USP50Q70EL3 AC091304.3-201ENST00000566500 716 ntBASIC16.83■□□□□ 0.28
USP50Q70EL3 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC16.83■□□□□ 0.28
USP50Q70EL3 AC132825.4-202ENST00000578792 434 ntBASIC16.83■□□□□ 0.28
USP50Q70EL3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 AC020931.1-201ENST00000589622 1346 ntBASIC16.83■□□□□ 0.28
USP50Q70EL3 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.83■□□□□ 0.28
USP50Q70EL3 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.83■□□□□ 0.28
USP50Q70EL3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP50Q70EL3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.82■□□□□ 0.28
USP50Q70EL3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 ACE3P-201ENST00000423435 1973 ntBASIC16.82■□□□□ 0.28
USP50Q70EL3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms