Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.62□□□□□ -0.23
HOXC5Q00444 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.62□□□□□ -0.23
HOXC5Q00444 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 POM121L8P-201ENST00000417732 1281 ntBASIC13.62□□□□□ -0.23
HOXC5Q00444 AC245100.3-201ENST00000441281 285 ntBASIC13.62□□□□□ -0.23
HOXC5Q00444 POM121L9P-203ENST00000441984 1285 ntBASIC13.62□□□□□ -0.23
HOXC5Q00444 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HOXC5Q00444 AC012441.1-201ENST00000446669 685 ntBASIC13.62□□□□□ -0.23
HOXC5Q00444 CRB3P1-201ENST00000449338 276 ntBASIC13.62□□□□□ -0.23
HOXC5Q00444 AC106760.1-201ENST00000508690 800 ntBASIC13.62□□□□□ -0.23
HOXC5Q00444 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.62□□□□□ -0.23
HOXC5Q00444 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.62□□□□□ -0.23
HOXC5Q00444 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.62□□□□□ -0.23
HOXC5Q00444 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC5Q00444 MST1P2-201ENST00000457982 2291 ntBASIC13.62□□□□□ -0.23
HOXC5Q00444 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC5Q00444 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC5Q00444 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC5Q00444 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC5Q00444 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HOXC5Q00444 AC009093.2-202ENST00000620513 2079 ntBASIC13.62□□□□□ -0.23
HOXC5Q00444 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HOXC5Q00444 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HOXC5Q00444 FKBP4P6-201ENST00000457486 1332 ntBASIC13.62□□□□□ -0.23
HOXC5Q00444 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HOXC5Q00444 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
HOXC5Q00444 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC5Q00444 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 AC011474.4-201ENST00000623523 2076 ntBASIC13.61□□□□□ -0.23
HOXC5Q00444 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 AL138709.1-201ENST00000614840 1693 ntBASIC13.61□□□□□ -0.23
HOXC5Q00444 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HOXC5Q00444 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.61□□□□□ -0.23
HOXC5Q00444 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 ACTG1P3-201ENST00000431775 1114 ntBASIC13.61□□□□□ -0.23
HOXC5Q00444 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 AL391280.1-201ENST00000506969 1062 ntBASIC13.61□□□□□ -0.23
HOXC5Q00444 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.61□□□□□ -0.23
HOXC5Q00444 AC068587.3-201ENST00000526613 355 ntBASIC13.61□□□□□ -0.23
HOXC5Q00444 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.61□□□□□ -0.23
HOXC5Q00444 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 AC138696.2-201ENST00000607376 223 ntBASIC13.61□□□□□ -0.23
HOXC5Q00444 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.61□□□□□ -0.23
HOXC5Q00444 ENPP7P14-201ENST00000621765 1040 ntBASIC13.61□□□□□ -0.23
HOXC5Q00444 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXC5Q00444 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.61□□□□□ -0.23
HOXC5Q00444 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HOXC5Q00444 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC5Q00444 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms