Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.5■□□□□ 0.23
TPM4P67936 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TPM4P67936 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TPM4P67936 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.5■□□□□ 0.23
TPM4P67936 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 AC073957.3-201ENST00000609998 6758 ntBASIC16.5■□□□□ 0.23
TPM4P67936 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM4P67936 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.5■□□□□ 0.23
TPM4P67936 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM4P67936 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TPM4P67936 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM4P67936 AC090643.2-201ENST00000623442 2029 ntBASIC16.5■□□□□ 0.23
TPM4P67936 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM4P67936 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM4P67936 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TPM4P67936 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM4P67936 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TPM4P67936 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM4P67936 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM4P67936 OR2I1P-208ENST00000641137 4948 ntBASIC16.49■□□□□ 0.23
TPM4P67936 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM4P67936 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 KRT18P13-201ENST00000400056 1290 ntBASIC16.49■□□□□ 0.23
TPM4P67936 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM4P67936 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.49■□□□□ 0.23
TPM4P67936 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM4P67936 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.49■□□□□ 0.23
TPM4P67936 SNHG9-202ENST00000564014 471 ntBASIC16.49■□□□□ 0.23
TPM4P67936 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM4P67936 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 AL391069.4-201ENST00000609583 481 ntBASIC16.49■□□□□ 0.23
TPM4P67936 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.49■□□□□ 0.23
TPM4P67936 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 HSPA8P5-201ENST00000456928 2069 ntBASIC16.49■□□□□ 0.23
TPM4P67936 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TPM4P67936 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TPM4P67936 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM4P67936 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM4P67936 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TPM4P67936 AC011498.7-201ENST00000624986 2027 ntBASIC16.48■□□□□ 0.23
TPM4P67936 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TPM4P67936 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TPM4P67936 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.48■□□□□ 0.23
TPM4P67936 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM4P67936 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM4P67936 AC107890.1-201ENST00000422478 521 ntBASIC16.48■□□□□ 0.23
TPM4P67936 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.48■□□□□ 0.23
TPM4P67936 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 VDAC1P7-201ENST00000462417 847 ntBASIC16.48■□□□□ 0.23
TPM4P67936 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM4P67936 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TPM4P67936 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms